Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015878145.1_cds_XP_016436678.1_32510
CDS Infomation

[gene=LOC107762799] [db_xref=GeneID:107762799] [protein=1-aminocyclopropane-1-carboxylate synthase-like] [protein_id=XP_016436678.1] [location=join(4577..4753,4861..4992,5461..5621,6549..7536)] [gbkey=CDS]
Sequence

ATGGTGTTCATTTCAGGCAACGTCCAAAAGCAGCAGCTTCTTTCAAAAATAGCCACAAAT
GATGGACATGGAGAAAACTCAGCTTATTTTGATGGTTGGAAGGCTTATGAAAATGATCCT
TTTCATCTCTCTAACAATCCTAATGGAGTTATTCAGATGGGTCTTGCAGAAAATCAGCTT
TGCTTTGATTTAATCCAAGAATGGGTGGTGAATAACCCAAAAGCCTCTATTTGCACAACT
GAAGGAGCTGAAGATTTCAAGGATATTGCCATTTTTCAAGACTATCATGGCTTGCCAGAG
TTTAGACAGGCAGTTGCAAGGTTTATGGAGAGAGTAAGAGGAGACAAAGTCACATTTGAC
CCAAGTCGCGTAGTAATGAGTGGAGGAGCAACAGGAGCTCATGAAATGTTGGCTTTTTGC
TTGGCTGATCCTGGGGATGCATTTTTGGTTCCTACTCCATATTATCCTGGATTTGATAGA
GATTTGAGGTGGAGAACTGGTGTACAACTATTTCCTATTGTTTGTGACAGTTCTAATGAT
TTCAAGGTTACTAGAAAAGCCTTAGAAGCTGCATATGAGAAAGCTCAAGAATCCAATATC
AAAATAAAGGGTTTGCTTATAAACAATCCATCAAATCCATTAGGCACTCTTCTTGACAGG
GACACACTCAAAGACATAGTAAGTTTCATTAATTCGAAAAACATCCACTTAGTTTGCGAC
GAAATTTATGCCGCCACTGTCTTTAATAAGCCAAATTTCATCAGCATTTCCCAAATACTA
GAGGAAAACGTTGGATTATGCAACCAAGATTTGGTACATATTGTTTATAGCTTGTCAAAG
GATTTGGGATTTCCAGGATTCAGGGTCGGAATTGTTTACTCGTACAACGACACAGTAGTC
AACATTGCTAGAAAAATGTCGAGTTTCGGGCTGGTTTCAACTCAGACACAACATTTGATT
GCATCAATGTTATCAGATGAAATTTTCGTCGAAAAATTCATTGCTGAGAGTTCTGAAAGG
CTGGGGAAAAGGCAGGGGATGTTCTCTAAAGGTCTAGCACAAGTTGGAATTAGTACATTG
AAGAGTAACGCAGGTTTATTTTTTTGGATGGATTTAAGAAGGCTACTAAAAGAGTCAACA
TTTGAAGCTGAATTGGAACTGTGGAGAATTATTATTAATGAAGTGAAACTTAATGTTTCA
CCAGGTTGTTCTTTTCATTGTTCTGAACCGGGCTGGTTTAGAGTTTGTTTTGCGAATATG
GACGATGAAACTATGAGAATTGCTTTAAGAAGGATAAGGAGTTTTGTGCTTCAAACAAAG
GGTATTACTAATAAAGTTGCTGCTTTCAAGAAACAATGCAGTAGGAGCAAACTTCAAATC
AGCTTATCATTTCGAAGATTGGATGATTTCAATTCACCAGCTCATTCTCCAATGAATTCT
CCTTTGGTCAGGACTTAA

Peptide Sequence

PEP ID

XP_016436678.1
PEP Infomation

PREDICTED: 1-aminocyclopropane-1-carboxylate synthase-like [Nicotiana tabacum]
Sequence

MVFISGNVQKQQLLSKIATNDGHGENSAYFDGWKAYENDPFHLSNNPNGVIQMGLAENQL
CFDLIQEWVVNNPKASICTTEGAEDFKDIAIFQDYHGLPEFRQAVARFMERVRGDKVTFD
PSRVVMSGGATGAHEMLAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLFPIVCDSSND
FKVTRKALEAAYEKAQESNIKIKGLLINNPSNPLGTLLDRDTLKDIVSFINSKNIHLVCD
EIYAATVFNKPNFISISQILEENVGLCNQDLVHIVYSLSKDLGFPGFRVGIVYSYNDTVV
NIARKMSSFGLVSTQTQHLIASMLSDEIFVEKFIAESSERLGKRQGMFSKGLAQVGISTL
KSNAGLFFWMDLRRLLKESTFEAELELWRIIINEVKLNVSPGCSFHCSEPGWFRVCFANM
DDETMRIALRRIRSFVLQTKGITNKVAAFKKQCSRSKLQISLSFRRLDDFNSPAHSPMNS
PLVRT

Transcript Sequence

Gene sequence data has not been registered.